HomeFreeBSD

biology/fasda: Update to 0.1.4

Description

biology/fasda: Update to 0.1.4

Add --debug
Replace --map-gene with --feature-type for more flexibility
Use extended REs for gff3 feature selection (default = RNA$|transcript$|gene_segment$, same as transcript in GTF)
Add --output-dir
Support |-separated ID aliases (report last alias)
Support outsourcing abundance calculation (default = stringtie)
Several bug fixes and minor enhancements

Changes: https://github.com/auerlab/fasda/releases

Details

Provenance
jwbAuthored on Aug 11 2023, 8:39 PM
Parents
R11:c978aad1b084: biology/biolibc: Update to 0.2.5
Branches
Unknown
Tags
Unknown